Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.69□□□□□ -0.7
Scrt1Q99M85 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.69□□□□□ -0.7
Scrt1Q99M85 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Mir7221-201ENSMUST00000184009 72 ntBASIC10.69□□□□□ -0.7
Scrt1Q99M85 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.69□□□□□ -0.7
Scrt1Q99M85 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Gm7600-201ENSMUST00000209657 785 ntBASIC10.69□□□□□ -0.7
Scrt1Q99M85 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Mir339-201ENSMUST00000083659 96 ntBASIC10.69□□□□□ -0.7
Scrt1Q99M85 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Gm17391-201ENSMUST00000171036 126 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Mir6546-201ENSMUST00000184460 62 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Gm19287-201ENSMUST00000203190 358 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 Gm1821-202ENSMUST00000227415 750 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.68□□□□□ -0.7
Scrt1Q99M85 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Scrt1Q99M85 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms