Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb3Q91XZ7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm22764-201ENSMUST00000158370 92 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm6562-201ENSMUST00000221903 464 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb3Q91XZ7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm12601-201ENSMUST00000118994 846 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm6461-201ENSMUST00000120015 633 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 AY702102-202ENSMUST00000194651 1173 ntBASIC12.34□□□□□ -0.43
Pcdhb3Q91XZ7 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms