Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Mir877-201ENSMUST00000104738 85 ntBASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Gm13875-201ENSMUST00000120162 282 ntBASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Gm14999-201ENSMUST00000121039 624 ntBASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Gm15276-201ENSMUST00000145953 498 ntBASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Gm27046-201ENSMUST00000182160 463 ntBASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga4Q91XY4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm9544-201ENSMUST00000223349 2482 ntBASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm13570-201ENSMUST00000140763 309 ntBASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 AC126253.1-202ENSMUST00000226732 835 ntBASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga4Q91XY4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms