Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm13665-201ENSMUST00000120830 528 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm14832-201ENSMUST00000121289 322 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm24990-201ENSMUST00000157406 323 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Rmrp-201ENSMUST00000157463 271 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm26361-201ENSMUST00000158868 186 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm2260-201ENSMUST00000184965 657 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm28882-201ENSMUST00000185504 314 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm44262-201ENSMUST00000204969 372 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retreg1dQ8VE91 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Gzmn-202ENSMUST00000225535 989 ntBASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retreg1dQ8VE91 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Retreg1dQ8VE91 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retreg1dQ8VE91 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retreg1dQ8VE91 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retreg1dQ8VE91 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retreg1dQ8VE91 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Retreg1dQ8VE91 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retreg1dQ8VE91 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retreg1dQ8VE91 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms