Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Gm9996-201ENSMUST00000070359 913 ntBASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ndc1Q8VCB1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Gm9083-201ENSMUST00000120423 819 ntBASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Mir6979-201ENSMUST00000183927 56 ntBASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Gm7003-201ENSMUST00000195089 312 ntBASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Gm44958-201ENSMUST00000203734 736 ntBASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ndc1Q8VCB1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ndc1Q8VCB1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms