Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.17□□□□□ -0.46
Vps39Q8R5L3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Gm9396-201ENSMUST00000076703 567 ntBASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps39Q8R5L3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps39Q8R5L3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 178.8 ms