Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC17.07■□□□□ 0.32
Cd109Q8R422 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd109Q8R422 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd109Q8R422 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd109Q8R422 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cd109Q8R422 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Olfr584-201ENSMUST00000098210 964 ntBASIC17.07■□□□□ 0.32
Cd109Q8R422 Gm44292-201ENSMUST00000205194 2364 ntBASIC17.07■□□□□ 0.32
Cd109Q8R422 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd109Q8R422 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 AC166836.1-201ENSMUST00000219933 1795 ntBASIC17.06■□□□□ 0.32
Cd109Q8R422 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC17.06■□□□□ 0.32
Cd109Q8R422 Gm23153-201ENSMUST00000175323 313 ntBASIC17.06■□□□□ 0.32
Cd109Q8R422 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cd109Q8R422 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Gm44158-201ENSMUST00000203881 505 ntBASIC17.06■□□□□ 0.32
Cd109Q8R422 Gm8342-201ENSMUST00000209839 757 ntBASIC17.06■□□□□ 0.32
Cd109Q8R422 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC17.06■□□□□ 0.32
Cd109Q8R422 AC153929.1-201ENSMUST00000219009 303 ntBASIC17.06■□□□□ 0.32
Cd109Q8R422 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Mirlet7i-201ENSMUST00000083472 85 ntBASIC17.06■□□□□ 0.32
Cd109Q8R422 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC17.06■□□□□ 0.32
Cd109Q8R422 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cd109Q8R422 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd109Q8R422 Gm37391-201ENSMUST00000194891 2318 ntBASIC17.06■□□□□ 0.32
Cd109Q8R422 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC17.05■□□□□ 0.32
Cd109Q8R422 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC17.05■□□□□ 0.32
Cd109Q8R422 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC17.05■□□□□ 0.32
Cd109Q8R422 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cd109Q8R422 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cd109Q8R422 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cd109Q8R422 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Cd109Q8R422 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Cd109Q8R422 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd109Q8R422 Gm14441-201ENSMUST00000121960 540 ntBASIC17.04■□□□□ 0.32
Cd109Q8R422 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cd109Q8R422 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cd109Q8R422 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC17.04■□□□□ 0.32
Cd109Q8R422 Gm42748-201ENSMUST00000199354 2341 ntBASIC17.04■□□□□ 0.32
Cd109Q8R422 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cd109Q8R422 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.04■□□□□ 0.32
Cd109Q8R422 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC17.04■□□□□ 0.32
Cd109Q8R422 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cd109Q8R422 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd109Q8R422 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms