Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gm24255-201ENSMUST00000104481 128 ntBASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gm15198-201ENSMUST00000117283 177 ntBASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gm5419-201ENSMUST00000119301 527 ntBASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gm27046-201ENSMUST00000182160 463 ntBASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.37□□□□□ -0.27
Trim9Q8C7M3 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.37□□□□□ -0.27
Trim9Q8C7M3 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Gzmn-202ENSMUST00000225535 989 ntBASIC13.37□□□□□ -0.27
Trim9Q8C7M3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim9Q8C7M3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm22323-201ENSMUST00000103832 109 ntBASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm14723-201ENSMUST00000118686 215 ntBASIC13.36□□□□□ -0.27
Trim9Q8C7M3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm15610-201ENSMUST00000120584 195 ntBASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm45331-201ENSMUST00000209868 554 ntBASIC13.36□□□□□ -0.27
Trim9Q8C7M3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim9Q8C7M3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms