Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Gm10268-201ENSMUST00000085340 555 ntBASIC11.39□□□□□ -0.59
Vps9d1Q8C190 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps9d1Q8C190 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm11964-201ENSMUST00000120982 444 ntBASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm11597-201ENSMUST00000121423 964 ntBASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm1335-201ENSMUST00000121653 386 ntBASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps9d1Q8C190 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Gm4034-201ENSMUST00000187674 480 ntBASIC11.37□□□□□ -0.59
Vps9d1Q8C190 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps9d1Q8C190 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms