Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Usp54Q8BL06 Gm5298-201ENSMUST00000201122 892 ntBASIC16.96■□□□□ 0.31
Usp54Q8BL06 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Usp54Q8BL06 Gm35713-201ENSMUST00000210516 199 ntBASIC16.96■□□□□ 0.31
Usp54Q8BL06 AC159376.1-201ENSMUST00000218504 630 ntBASIC16.96■□□□□ 0.31
Usp54Q8BL06 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp54Q8BL06 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp54Q8BL06 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp54Q8BL06 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp54Q8BL06 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp54Q8BL06 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp54Q8BL06 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Mir671-201ENSMUST00000102432 98 ntBASIC16.95■□□□□ 0.3
Usp54Q8BL06 Gm13351-201ENSMUST00000118087 414 ntBASIC16.95■□□□□ 0.3
Usp54Q8BL06 Gm6322-201ENSMUST00000118789 1004 ntBASIC16.95■□□□□ 0.3
Usp54Q8BL06 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.95■□□□□ 0.3
Usp54Q8BL06 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp54Q8BL06 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp54Q8BL06 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm8522-201ENSMUST00000118416 1929 ntBASIC16.94■□□□□ 0.3
Usp54Q8BL06 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm9673-201ENSMUST00000119287 781 ntBASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm12783-201ENSMUST00000121425 397 ntBASIC16.94■□□□□ 0.3
Usp54Q8BL06 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm26047-201ENSMUST00000157308 113 ntBASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm26989-201ENSMUST00000182608 749 ntBASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm9135-201ENSMUST00000182963 990 ntBASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm26047-202ENSMUST00000198840 115 ntBASIC16.94■□□□□ 0.3
Usp54Q8BL06 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm45758-201ENSMUST00000212448 1006 ntBASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp54Q8BL06 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp54Q8BL06 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Gm44056-201ENSMUST00000204623 1427 ntBASIC16.93■□□□□ 0.3
Usp54Q8BL06 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Usp54Q8BL06 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms