Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh19Q80TF3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh19Q80TF3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh19Q80TF3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Gm23200-201ENSMUST00000104379 132 ntBASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Gm12380-201ENSMUST00000119012 544 ntBASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Rprl1-201ENSMUST00000158050 327 ntBASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh19Q80TF3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Gm25732-201ENSMUST00000175168 60 ntBASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Mir6979-201ENSMUST00000183927 56 ntBASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Gm7003-201ENSMUST00000195089 312 ntBASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Gm43184-201ENSMUST00000197247 542 ntBASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Gm5455-201ENSMUST00000058710 715 ntBASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh19Q80TF3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh19Q80TF3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms