Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Vma21Q78T54 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Vma21Q78T54 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Vma21Q78T54 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.87□□□□□ -0.83
Vma21Q78T54 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Gm4984-201ENSMUST00000115987 360 ntBASIC9.87□□□□□ -0.83
Vma21Q78T54 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.87□□□□□ -0.83
Vma21Q78T54 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Vma21Q78T54 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Vma21Q78T54 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Vma21Q78T54 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Vma21Q78T54 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.87□□□□□ -0.83
Vma21Q78T54 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Vma21Q78T54 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Vma21Q78T54 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Gm16177-201ENSMUST00000120728 718 ntBASIC9.86□□□□□ -0.83
Vma21Q78T54 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.86□□□□□ -0.83
Vma21Q78T54 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.86□□□□□ -0.83
Vma21Q78T54 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.86□□□□□ -0.83
Vma21Q78T54 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.86□□□□□ -0.83
Vma21Q78T54 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.86□□□□□ -0.83
Vma21Q78T54 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.86□□□□□ -0.83
Vma21Q78T54 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.86□□□□□ -0.83
Vma21Q78T54 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.86□□□□□ -0.83
Vma21Q78T54 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Vma21Q78T54 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Vma21Q78T54 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Vma21Q78T54 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms