Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm25998-201ENSMUST00000175397 53 ntBASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm8197-202ENSMUST00000193422 934 ntBASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm34379-201ENSMUST00000195036 290 ntBASIC14.03□□□□□ -0.16
Scn9aQ62205 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Scn9aQ62205 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.03□□□□□ -0.16
Scn9aQ62205 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn9aQ62205 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn9aQ62205 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn9aQ62205 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.02□□□□□ -0.16
Scn9aQ62205 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn9aQ62205 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn9aQ62205 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn9aQ62205 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Scn9aQ62205 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn9aQ62205 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn9aQ62205 Gm15610-201ENSMUST00000120584 195 ntBASIC14.02□□□□□ -0.16
Scn9aQ62205 Gm12712-201ENSMUST00000120676 801 ntBASIC14.02□□□□□ -0.16
Scn9aQ62205 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.02□□□□□ -0.16
Scn9aQ62205 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn9aQ62205 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn9aQ62205 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn9aQ62205 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn9aQ62205 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn9aQ62205 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn9aQ62205 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn9aQ62205 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.02□□□□□ -0.16
Scn9aQ62205 AC158388.3-202ENSMUST00000225517 775 ntBASIC14.02□□□□□ -0.16
Scn9aQ62205 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn9aQ62205 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn9aQ62205 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn9aQ62205 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scn9aQ62205 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scn9aQ62205 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn9aQ62205 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scn9aQ62205 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.02□□□□□ -0.17
Scn9aQ62205 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Scn9aQ62205 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Gm12663-201ENSMUST00000118481 958 ntBASIC14.02□□□□□ -0.17
Scn9aQ62205 Gm14441-201ENSMUST00000121960 540 ntBASIC14.02□□□□□ -0.17
Scn9aQ62205 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn9aQ62205 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn9aQ62205 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn9aQ62205 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.02□□□□□ -0.17
Scn9aQ62205 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn9aQ62205 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.02□□□□□ -0.17
Scn9aQ62205 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn9aQ62205 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn9aQ62205 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Mir181d-201ENSMUST00000102383 72 ntBASIC14.01□□□□□ -0.17
Scn9aQ62205 Gm12274-201ENSMUST00000120062 385 ntBASIC14.01□□□□□ -0.17
Scn9aQ62205 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn9aQ62205 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Mir6941-201ENSMUST00000184711 59 ntBASIC14.01□□□□□ -0.17
Scn9aQ62205 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC14.01□□□□□ -0.17
Scn9aQ62205 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scn9aQ62205 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Scn9aQ62205 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn9aQ62205 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms