Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctr9Q62018 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctr9Q62018 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ctr9Q62018 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ctr9Q62018 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.35□□□□□ -0.11
Ctr9Q62018 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Gm23912-201ENSMUST00000104687 87 ntBASIC14.35□□□□□ -0.11
Ctr9Q62018 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Gm15711-201ENSMUST00000118889 535 ntBASIC14.35□□□□□ -0.11
Ctr9Q62018 Gm12164-201ENSMUST00000121695 551 ntBASIC14.35□□□□□ -0.11
Ctr9Q62018 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.35□□□□□ -0.11
Ctr9Q62018 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.35□□□□□ -0.11
Ctr9Q62018 Mir5120-201ENSMUST00000175020 78 ntBASIC14.35□□□□□ -0.11
Ctr9Q62018 Mir5132-201ENSMUST00000175166 71 ntBASIC14.35□□□□□ -0.11
Ctr9Q62018 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctr9Q62018 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.35□□□□□ -0.11
Ctr9Q62018 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.35□□□□□ -0.11
Ctr9Q62018 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ctr9Q62018 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctr9Q62018 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctr9Q62018 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ctr9Q62018 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctr9Q62018 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.34□□□□□ -0.11
Ctr9Q62018 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Mir3102-201ENSMUST00000175555 104 ntBASIC14.34□□□□□ -0.11
Ctr9Q62018 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.34□□□□□ -0.11
Ctr9Q62018 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ctr9Q62018 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctr9Q62018 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
Ctr9Q62018 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ctr9Q62018 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctr9Q62018 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ctr9Q62018 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ctr9Q62018 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Gm22133-201ENSMUST00000102082 109 ntBASIC14.33□□□□□ -0.12
Ctr9Q62018 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Gm14247-201ENSMUST00000120950 237 ntBASIC14.33□□□□□ -0.12
Ctr9Q62018 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ctr9Q62018 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.33□□□□□ -0.12
Ctr9Q62018 Gm4607-201ENSMUST00000206649 577 ntBASIC14.33□□□□□ -0.12
Ctr9Q62018 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctr9Q62018 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms