Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.01□□□□□ -0.49
Scn2bQ56A07 Gm42937-201ENSMUST00000197360 752 ntBASIC12.01□□□□□ -0.49
Scn2bQ56A07 Gm18054-201ENSMUST00000207539 555 ntBASIC12.01□□□□□ -0.49
Scn2bQ56A07 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.01□□□□□ -0.49
Scn2bQ56A07 Gm9823-201ENSMUST00000051212 327 ntBASIC12.01□□□□□ -0.49
Scn2bQ56A07 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.01□□□□□ -0.49
Scn2bQ56A07 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.01□□□□□ -0.49
Scn2bQ56A07 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scn2bQ56A07 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scn2bQ56A07 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Gm43984-201ENSMUST00000204572 2864 ntBASIC12□□□□□ -0.49
Scn2bQ56A07 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12□□□□□ -0.49
Scn2bQ56A07 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Scn2bQ56A07 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Mir1247-201ENSMUST00000116706 82 ntBASIC12□□□□□ -0.49
Scn2bQ56A07 Gm13342-201ENSMUST00000121055 207 ntBASIC12□□□□□ -0.49
Scn2bQ56A07 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12□□□□□ -0.49
Scn2bQ56A07 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scn2bQ56A07 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12□□□□□ -0.49
Scn2bQ56A07 Gm10608-202ENSMUST00000213924 676 ntBASIC12□□□□□ -0.49
Scn2bQ56A07 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scn2bQ56A07 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scn2bQ56A07 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scn2bQ56A07 Gm42853-201ENSMUST00000201273 1387 ntBASIC12□□□□□ -0.49
Scn2bQ56A07 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12□□□□□ -0.49
Scn2bQ56A07 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Scn2bQ56A07 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scn2bQ56A07 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scn2bQ56A07 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scn2bQ56A07 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.99□□□□□ -0.49
Scn2bQ56A07 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Gm10434-201ENSMUST00000101158 471 ntBASIC11.99□□□□□ -0.49
Scn2bQ56A07 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Gm6007-201ENSMUST00000208170 823 ntBASIC11.99□□□□□ -0.49
Scn2bQ56A07 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.99□□□□□ -0.49
Scn2bQ56A07 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.99□□□□□ -0.49
Scn2bQ56A07 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.99□□□□□ -0.49
Scn2bQ56A07 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn2bQ56A07 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms