Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Paupar-201ENSMUST00000194826 3482 ntBASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Gm14127-201ENSMUST00000117906 678 ntBASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Gm14832-201ENSMUST00000121289 322 ntBASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.44□□□□□ -0.58
Brf2Q3UAW9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.44□□□□□ -0.58
Brf2Q3UAW9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Map1b-203ENSMUST00000223725 2669 ntBASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.44□□□□□ -0.58
Brf2Q3UAW9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm11531-201ENSMUST00000117614 555 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm24845-201ENSMUST00000158034 109 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm26956-201ENSMUST00000182176 986 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm18711-201ENSMUST00000199341 750 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm35960-201ENSMUST00000202712 767 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Olfr284-202ENSMUST00000206647 966 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm6013-201ENSMUST00000212264 699 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm5950-201ENSMUST00000213337 772 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm9996-201ENSMUST00000070359 913 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Brf2Q3UAW9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.43□□□□□ -0.58
Brf2Q3UAW9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms