Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
GabpaQ00422 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.77□□□□□ -0.21
GabpaQ00422 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.77□□□□□ -0.21
GabpaQ00422 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
GabpaQ00422 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
GabpaQ00422 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GabpaQ00422 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GabpaQ00422 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GabpaQ00422 Gm15595-201ENSMUST00000120840 961 ntBASIC13.76□□□□□ -0.21
GabpaQ00422 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.76□□□□□ -0.21
GabpaQ00422 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.76□□□□□ -0.21
GabpaQ00422 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GabpaQ00422 Gm28686-201ENSMUST00000187404 609 ntBASIC13.76□□□□□ -0.21
GabpaQ00422 Mir7686-201ENSMUST00000200604 57 ntBASIC13.76□□□□□ -0.21
GabpaQ00422 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Gm8285-201ENSMUST00000208293 759 ntBASIC13.76□□□□□ -0.21
GabpaQ00422 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.76□□□□□ -0.21
GabpaQ00422 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.76□□□□□ -0.21
GabpaQ00422 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.76□□□□□ -0.21
GabpaQ00422 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GabpaQ00422 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.76□□□□□ -0.21
GabpaQ00422 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.76□□□□□ -0.21
GabpaQ00422 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
GabpaQ00422 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.76□□□□□ -0.21
GabpaQ00422 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GabpaQ00422 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GabpaQ00422 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GabpaQ00422 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Gm11663-201ENSMUST00000117888 290 ntBASIC13.75□□□□□ -0.21
GabpaQ00422 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GabpaQ00422 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.75□□□□□ -0.21
GabpaQ00422 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.75□□□□□ -0.21
GabpaQ00422 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
GabpaQ00422 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GabpaQ00422 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.75□□□□□ -0.21
GabpaQ00422 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GabpaQ00422 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.74□□□□□ -0.21
GabpaQ00422 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.74□□□□□ -0.21
GabpaQ00422 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GabpaQ00422 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms