Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
Vamp3P63024 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.17□□□□□ -0.94
Vamp3P63024 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.17□□□□□ -0.94
Vamp3P63024 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC9.17□□□□□ -0.94
Vamp3P63024 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.17□□□□□ -0.94
Vamp3P63024 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.17□□□□□ -0.94
Vamp3P63024 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.17□□□□□ -0.94
Vamp3P63024 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Vamp3P63024 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Vamp3P63024 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Vamp3P63024 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vamp3P63024 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Vamp3P63024 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Vamp3P63024 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.16□□□□□ -0.94
Vamp3P63024 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Vamp3P63024 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
Vamp3P63024 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Vamp3P63024 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC9.16□□□□□ -0.94
Vamp3P63024 Gm9385-201ENSMUST00000117563 472 ntBASIC9.16□□□□□ -0.94
Vamp3P63024 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.16□□□□□ -0.94
Vamp3P63024 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.16□□□□□ -0.94
Vamp3P63024 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Vamp3P63024 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
Vamp3P63024 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Vamp3P63024 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Vamp3P63024 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vamp3P63024 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vamp3P63024 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vamp3P63024 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms