Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Tyms-ps-201ENSMUST00000219550 915 ntBASIC8.72□□□□□ -1.01
Ube2d3P61079 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Ube2d3P61079 Gm37580-201ENSMUST00000192408 2800 ntBASIC8.72□□□□□ -1.01
Ube2d3P61079 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC8.72□□□□□ -1.01
Ube2d3P61079 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Ube2d3P61079 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.72□□□□□ -1.01
Ube2d3P61079 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC8.72□□□□□ -1.01
Ube2d3P61079 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Ube2d3P61079 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ube2d3P61079 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ube2d3P61079 Gm7789-202ENSMUST00000211273 1400 ntBASIC8.71□□□□□ -1.01
Ube2d3P61079 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
Ube2d3P61079 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ube2d3P61079 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
Ube2d3P61079 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC8.71□□□□□ -1.01
Ube2d3P61079 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ube2d3P61079 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ube2d3P61079 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Ube2d3P61079 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ube2d3P61079 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.01
Ube2d3P61079 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC8.71□□□□□ -1.01
Ube2d3P61079 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC8.71□□□□□ -1.01
Ube2d3P61079 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.01
Ube2d3P61079 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ube2d3P61079 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ube2d3P61079 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ube2d3P61079 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ube2d3P61079 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.01
Ube2d3P61079 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Gm38055-201ENSMUST00000195353 2217 ntBASIC8.71□□□□□ -1.02
Ube2d3P61079 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Gm16177-201ENSMUST00000120728 718 ntBASIC8.71□□□□□ -1.02
Ube2d3P61079 Gm1335-201ENSMUST00000121653 386 ntBASIC8.71□□□□□ -1.02
Ube2d3P61079 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Gm29127-201ENSMUST00000188304 517 ntBASIC8.71□□□□□ -1.02
Ube2d3P61079 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Gm43818-201ENSMUST00000200605 466 ntBASIC8.71□□□□□ -1.02
Ube2d3P61079 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Gm45930-201ENSMUST00000221330 292 ntBASIC8.71□□□□□ -1.02
Ube2d3P61079 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Gm14132-201ENSMUST00000117188 1719 ntBASIC8.71□□□□□ -1.02
Ube2d3P61079 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC8.71□□□□□ -1.02
Ube2d3P61079 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ube2d3P61079 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.7□□□□□ -1.02
Ube2d3P61079 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.7□□□□□ -1.02
Ube2d3P61079 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Ube2d3P61079 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC8.7□□□□□ -1.02
Ube2d3P61079 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube2d3P61079 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Ube2d3P61079 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms