Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Msh6P54276 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Msh6P54276 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Msh6P54276 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.31■□□□□ 0.04
Msh6P54276 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.31■□□□□ 0.04
Msh6P54276 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh6P54276 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.3■□□□□ 0.04
Msh6P54276 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Msh6P54276 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.3■□□□□ 0.04
Msh6P54276 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Msh6P54276 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.3■□□□□ 0.04
Msh6P54276 Gm15172-201ENSMUST00000118945 1046 ntBASIC15.3■□□□□ 0.04
Msh6P54276 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.3■□□□□ 0.04
Msh6P54276 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC15.3■□□□□ 0.04
Msh6P54276 Gm8815-201ENSMUST00000173809 620 ntBASIC15.3■□□□□ 0.04
Msh6P54276 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Gm44329-201ENSMUST00000197469 112 ntBASIC15.3■□□□□ 0.04
Msh6P54276 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.3■□□□□ 0.04
Msh6P54276 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.3■□□□□ 0.04
Msh6P54276 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.3■□□□□ 0.04
Msh6P54276 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Msh6P54276 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.3■□□□□ 0.04
Msh6P54276 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.3■□□□□ 0.04
Msh6P54276 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 AC122840.1-201ENSMUST00000220915 3334 ntBASIC15.3■□□□□ 0.04
Msh6P54276 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.3■□□□□ 0.04
Msh6P54276 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh6P54276 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Msh6P54276 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Msh6P54276 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.29■□□□□ 0.04
Msh6P54276 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.29■□□□□ 0.04
Msh6P54276 Gm22920-201ENSMUST00000102175 109 ntBASIC15.29■□□□□ 0.04
Msh6P54276 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Msh6P54276 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Gm1848-201ENSMUST00000120711 789 ntBASIC15.29■□□□□ 0.04
Msh6P54276 Gm15566-201ENSMUST00000121130 590 ntBASIC15.29■□□□□ 0.04
Msh6P54276 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC15.29■□□□□ 0.04
Msh6P54276 Gm6485-201ENSMUST00000160676 439 ntBASIC15.29■□□□□ 0.04
Msh6P54276 Gm4310-201ENSMUST00000177847 889 ntBASIC15.29■□□□□ 0.04
Msh6P54276 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.29■□□□□ 0.04
Msh6P54276 Gm37458-201ENSMUST00000194055 410 ntBASIC15.29■□□□□ 0.04
Msh6P54276 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Msh6P54276 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.29■□□□□ 0.04
Msh6P54276 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.29■□□□□ 0.04
Msh6P54276 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.29■□□□□ 0.04
Msh6P54276 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.29■□□□□ 0.04
Msh6P54276 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
Msh6P54276 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Msh6P54276 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Msh6P54276 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh6P54276 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.29■□□□□ 0.04
Msh6P54276 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms