Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ercc3P49135 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ercc3P49135 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Gm14644-201ENSMUST00000116671 647 ntBASIC14.43□□□□□ -0.1
Ercc3P49135 Gm12015-201ENSMUST00000117065 843 ntBASIC14.43□□□□□ -0.1
Ercc3P49135 Gm14208-201ENSMUST00000119645 678 ntBASIC14.43□□□□□ -0.1
Ercc3P49135 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.43□□□□□ -0.1
Ercc3P49135 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ercc3P49135 Gm44124-201ENSMUST00000204159 472 ntBASIC14.43□□□□□ -0.1
Ercc3P49135 Gm44882-201ENSMUST00000205702 802 ntBASIC14.43□□□□□ -0.1
Ercc3P49135 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.43□□□□□ -0.1
Ercc3P49135 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.43□□□□□ -0.1
Ercc3P49135 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.43□□□□□ -0.1
Ercc3P49135 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ercc3P49135 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ercc3P49135 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.43□□□□□ -0.1
Ercc3P49135 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.42□□□□□ -0.1
Ercc3P49135 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.42□□□□□ -0.1
Ercc3P49135 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.42□□□□□ -0.1
Ercc3P49135 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ercc3P49135 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.42□□□□□ -0.1
Ercc3P49135 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.42□□□□□ -0.1
Ercc3P49135 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.42□□□□□ -0.1
Ercc3P49135 Rprl1-201ENSMUST00000158050 327 ntBASIC14.42□□□□□ -0.1
Ercc3P49135 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Gm45186-201ENSMUST00000206874 478 ntBASIC14.42□□□□□ -0.1
Ercc3P49135 Gm44651-201ENSMUST00000207343 372 ntBASIC14.42□□□□□ -0.1
Ercc3P49135 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.42□□□□□ -0.1
Ercc3P49135 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.42□□□□□ -0.1
Ercc3P49135 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ercc3P49135 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ercc3P49135 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.42□□□□□ -0.1
Ercc3P49135 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ercc3P49135 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.42□□□□□ -0.1
Ercc3P49135 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.41□□□□□ -0.1
Ercc3P49135 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.41□□□□□ -0.1
Ercc3P49135 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Ercc3P49135 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.41□□□□□ -0.1
Ercc3P49135 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ercc3P49135 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ercc3P49135 Gm2383-201ENSMUST00000181461 807 ntBASIC14.41□□□□□ -0.1
Ercc3P49135 Gm7003-201ENSMUST00000195089 312 ntBASIC14.41□□□□□ -0.1
Ercc3P49135 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.41□□□□□ -0.1
Ercc3P49135 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.41□□□□□ -0.1
Ercc3P49135 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.41□□□□□ -0.1
Ercc3P49135 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ercc3P49135 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.41□□□□□ -0.1
Ercc3P49135 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc3P49135 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms