Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sox2P48432 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox2P48432 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Sox2P48432 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.35□□□□□ -0.59
Sox2P48432 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.35□□□□□ -0.59
Sox2P48432 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Sox2P48432 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Sox2P48432 Gm23984-201ENSMUST00000157139 203 ntBASIC11.35□□□□□ -0.59
Sox2P48432 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.35□□□□□ -0.59
Sox2P48432 Gm8018-201ENSMUST00000173536 789 ntBASIC11.35□□□□□ -0.59
Sox2P48432 Gm4271-201ENSMUST00000174444 973 ntBASIC11.35□□□□□ -0.59
Sox2P48432 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Gm5866-201ENSMUST00000177881 973 ntBASIC11.35□□□□□ -0.59
Sox2P48432 Gm8652-201ENSMUST00000181363 964 ntBASIC11.35□□□□□ -0.59
Sox2P48432 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.35□□□□□ -0.59
Sox2P48432 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.35□□□□□ -0.59
Sox2P48432 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.35□□□□□ -0.59
Sox2P48432 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.35□□□□□ -0.59
Sox2P48432 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox2P48432 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.35□□□□□ -0.59
Sox2P48432 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox2P48432 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox2P48432 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox2P48432 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox2P48432 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.34□□□□□ -0.59
Sox2P48432 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox2P48432 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Sox2P48432 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox2P48432 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.34□□□□□ -0.59
Sox2P48432 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Gm11918-201ENSMUST00000121660 179 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.34□□□□□ -0.59
Sox2P48432 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Sox2P48432 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms