Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-6P43688 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-6P43688 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-6P43688 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.52□□□□□ -0.57
Nkx2-6P43688 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.52□□□□□ -0.57
Nkx2-6P43688 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nkx2-6P43688 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx2-6P43688 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-6P43688 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-6P43688 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nkx2-6P43688 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.51□□□□□ -0.57
Nkx2-6P43688 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Gm15515-201ENSMUST00000117827 822 ntBASIC11.51□□□□□ -0.57
Nkx2-6P43688 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Gm18711-201ENSMUST00000199341 750 ntBASIC11.51□□□□□ -0.57
Nkx2-6P43688 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.51□□□□□ -0.57
Nkx2-6P43688 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-6P43688 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.51□□□□□ -0.57
Nkx2-6P43688 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.5□□□□□ -0.57
Nkx2-6P43688 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.5□□□□□ -0.57
Nkx2-6P43688 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.5□□□□□ -0.57
Nkx2-6P43688 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Gm11511-201ENSMUST00000118146 540 ntBASIC11.5□□□□□ -0.57
Nkx2-6P43688 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.5□□□□□ -0.57
Nkx2-6P43688 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.5□□□□□ -0.57
Nkx2-6P43688 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.5□□□□□ -0.57
Nkx2-6P43688 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-6P43688 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms