Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.72□□□□□ -0.53
Tnfsf4P43488 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.72□□□□□ -0.53
Tnfsf4P43488 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.72□□□□□ -0.53
Tnfsf4P43488 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm24548-201ENSMUST00000158650 108 ntBASIC11.72□□□□□ -0.53
Tnfsf4P43488 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm27023-201ENSMUST00000182372 285 ntBASIC11.72□□□□□ -0.53
Tnfsf4P43488 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm42937-201ENSMUST00000197360 752 ntBASIC11.72□□□□□ -0.53
Tnfsf4P43488 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.72□□□□□ -0.53
Tnfsf4P43488 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Snora73a-201ENSMUST00000082453 205 ntBASIC11.72□□□□□ -0.53
Tnfsf4P43488 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.71□□□□□ -0.53
Tnfsf4P43488 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.71□□□□□ -0.53
Tnfsf4P43488 Gm23912-201ENSMUST00000104687 87 ntBASIC11.71□□□□□ -0.53
Tnfsf4P43488 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Gm4984-201ENSMUST00000115987 360 ntBASIC11.71□□□□□ -0.53
Tnfsf4P43488 Gm12036-201ENSMUST00000120008 530 ntBASIC11.71□□□□□ -0.53
Tnfsf4P43488 Gm14999-201ENSMUST00000121039 624 ntBASIC11.71□□□□□ -0.53
Tnfsf4P43488 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.71□□□□□ -0.53
Tnfsf4P43488 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfsf4P43488 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfsf4P43488 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms