Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC17.8■□□□□ 0.44
Chd1P40201 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1P40201 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC17.79■□□□□ 0.44
Chd1P40201 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.79■□□□□ 0.44
Chd1P40201 Gm12345-201ENSMUST00000119288 898 ntBASIC17.79■□□□□ 0.44
Chd1P40201 Gm6758-201ENSMUST00000119643 1055 ntBASIC17.79■□□□□ 0.44
Chd1P40201 Gm15329-201ENSMUST00000121408 155 ntBASIC17.79■□□□□ 0.44
Chd1P40201 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC17.79■□□□□ 0.44
Chd1P40201 Gm5650-201ENSMUST00000209641 598 ntBASIC17.79■□□□□ 0.44
Chd1P40201 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chd1P40201 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Gm38192-201ENSMUST00000194364 1847 ntBASIC17.79■□□□□ 0.44
Chd1P40201 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Chd1P40201 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Chd1P40201 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chd1P40201 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1P40201 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC17.78■□□□□ 0.44
Chd1P40201 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Gm15625-201ENSMUST00000117617 1093 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Gm9133-201ENSMUST00000118289 540 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC17.78■□□□□ 0.44
Chd1P40201 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Gm5210-201ENSMUST00000182150 1010 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC17.78■□□□□ 0.44
Chd1P40201 Gm17936-201ENSMUST00000199413 988 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC17.78■□□□□ 0.44
Chd1P40201 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Chd1P40201 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Gm8968-201ENSMUST00000199133 1303 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Gm44942-201ENSMUST00000096093 2072 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.78■□□□□ 0.44
Chd1P40201 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.78■□□□□ 0.44
Chd1P40201 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Gm14006-201ENSMUST00000122132 981 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Gm19013-201ENSMUST00000183895 1222 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Gm19014-201ENSMUST00000184828 1189 ntBASIC17.78■□□□□ 0.44
Chd1P40201 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Chd1P40201 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC17.78■□□□□ 0.44
Chd1P40201 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Chd1P40201 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1P40201 Kcnk16-202ENSMUST00000225596 2127 ntBASIC17.77■□□□□ 0.44
Chd1P40201 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC17.77■□□□□ 0.44
Chd1P40201 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Chd1P40201 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chd1P40201 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Chd1P40201 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Defa-ps17-201ENSMUST00000121849 171 ntBASIC17.77■□□□□ 0.44
Chd1P40201 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Mir6387-201ENSMUST00000184042 108 ntBASIC17.77■□□□□ 0.44
Chd1P40201 AC174797.2-201ENSMUST00000225835 165 ntBASIC17.77■□□□□ 0.44
Chd1P40201 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1P40201 Gm6304-201ENSMUST00000096579 447 ntBASIC17.77■□□□□ 0.44
Chd1P40201 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd1P40201 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd1P40201 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd1P40201 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chd1P40201 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd1P40201 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms