Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.47□□□□□ -0.73
Slc6a1P31648 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.47□□□□□ -0.73
Slc6a1P31648 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc6a1P31648 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Slc6a1P31648 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Slc6a1P31648 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Slc6a1P31648 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Slc6a1P31648 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.46□□□□□ -0.73
Slc6a1P31648 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Gm42550-201ENSMUST00000201553 960 ntBASIC10.46□□□□□ -0.73
Slc6a1P31648 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.46□□□□□ -0.73
Slc6a1P31648 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.46□□□□□ -0.73
Slc6a1P31648 Gm18473-201ENSMUST00000220543 868 ntBASIC10.46□□□□□ -0.73
Slc6a1P31648 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Mir339-201ENSMUST00000083659 96 ntBASIC10.46□□□□□ -0.73
Slc6a1P31648 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc6a1P31648 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.46□□□□□ -0.74
Slc6a1P31648 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Slc6a1P31648 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.46□□□□□ -0.74
Slc6a1P31648 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.46□□□□□ -0.74
Slc6a1P31648 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Slc6a1P31648 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Slc6a1P31648 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc6a1P31648 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.45□□□□□ -0.74
Slc6a1P31648 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.45□□□□□ -0.74
Slc6a1P31648 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Gm15376-201ENSMUST00000122258 783 ntBASIC10.45□□□□□ -0.74
Slc6a1P31648 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.45□□□□□ -0.74
Slc6a1P31648 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Slc6a1P31648 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms