Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.92□□□□□ -0.82
Sdc1P18828 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.92□□□□□ -0.82
Sdc1P18828 Gm23363-201ENSMUST00000175024 79 ntBASIC9.92□□□□□ -0.82
Sdc1P18828 Gm28693-202ENSMUST00000190758 331 ntBASIC9.92□□□□□ -0.82
Sdc1P18828 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Gm21362-201ENSMUST00000194272 928 ntBASIC9.92□□□□□ -0.82
Sdc1P18828 Gm38223-201ENSMUST00000194484 695 ntBASIC9.92□□□□□ -0.82
Sdc1P18828 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.92□□□□□ -0.82
Sdc1P18828 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.92□□□□□ -0.82
Sdc1P18828 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.92□□□□□ -0.82
Sdc1P18828 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Gm10175-201ENSMUST00000086013 645 ntBASIC9.92□□□□□ -0.82
Sdc1P18828 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Sdc1P18828 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Sdc1P18828 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.92□□□□□ -0.82
Sdc1P18828 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Sdc1P18828 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sdc1P18828 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sdc1P18828 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Sdc1P18828 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sdc1P18828 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.91□□□□□ -0.82
Sdc1P18828 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.91□□□□□ -0.82
Sdc1P18828 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Sdc1P18828 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Sdc1P18828 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.91□□□□□ -0.82
Sdc1P18828 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.91□□□□□ -0.82
Sdc1P18828 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.91□□□□□ -0.82
Sdc1P18828 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Sdc1P18828 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.91□□□□□ -0.82
Sdc1P18828 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.91□□□□□ -0.82
Sdc1P18828 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.91□□□□□ -0.82
Sdc1P18828 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.91□□□□□ -0.82
Sdc1P18828 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Sdc1P18828 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.91□□□□□ -0.82
Sdc1P18828 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Sdc1P18828 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sdc1P18828 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.91□□□□□ -0.82
Sdc1P18828 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms