Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sdc4O35988 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sdc4O35988 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.52□□□□□ -0.41
Sdc4O35988 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.51□□□□□ -0.41
Sdc4O35988 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Sdc4O35988 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sdc4O35988 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.51□□□□□ -0.41
Sdc4O35988 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.51□□□□□ -0.41
Sdc4O35988 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.51□□□□□ -0.41
Sdc4O35988 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.51□□□□□ -0.41
Sdc4O35988 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.51□□□□□ -0.41
Sdc4O35988 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.51□□□□□ -0.41
Sdc4O35988 Gm7848-201ENSMUST00000210739 718 ntBASIC12.51□□□□□ -0.41
Sdc4O35988 Gm4157-201ENSMUST00000211647 679 ntBASIC12.51□□□□□ -0.41
Sdc4O35988 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Gm26448-201ENSMUST00000082446 203 ntBASIC12.51□□□□□ -0.41
Sdc4O35988 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sdc4O35988 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.51□□□□□ -0.41
Sdc4O35988 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.51□□□□□ -0.41
Sdc4O35988 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sdc4O35988 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sdc4O35988 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Sdc4O35988 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.5□□□□□ -0.41
Sdc4O35988 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.5□□□□□ -0.41
Sdc4O35988 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sdc4O35988 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Sdc4O35988 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sdc4O35988 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sdc4O35988 Gm12501-201ENSMUST00000119163 529 ntBASIC12.5□□□□□ -0.41
Sdc4O35988 Gm11331-201ENSMUST00000119764 288 ntBASIC12.5□□□□□ -0.41
Sdc4O35988 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.5□□□□□ -0.41
Sdc4O35988 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.5□□□□□ -0.41
Sdc4O35988 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.5□□□□□ -0.41
Sdc4O35988 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.5□□□□□ -0.41
Sdc4O35988 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Sdc4O35988 Gm4607-201ENSMUST00000206649 577 ntBASIC12.5□□□□□ -0.41
Sdc4O35988 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.5□□□□□ -0.41
Sdc4O35988 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sdc4O35988 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.5□□□□□ -0.41
Sdc4O35988 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sdc4O35988 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Sdc4O35988 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sdc4O35988 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc4O35988 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.49□□□□□ -0.41
Sdc4O35988 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sdc4O35988 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms