Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cpsf4lE9Q2N0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cpsf4lE9Q2N0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.27□□□□□ -0.76
Cpsf4lE9Q2N0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cpsf4lE9Q2N0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cpsf4lE9Q2N0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cpsf4lE9Q2N0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cpsf4lE9Q2N0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cpsf4lE9Q2N0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Gm26083-201ENSMUST00000157904 193 ntBASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Gm5706-201ENSMUST00000181525 993 ntBASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cpsf4lE9Q2N0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Gm13665-201ENSMUST00000120830 528 ntBASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Gm17931-201ENSMUST00000208132 634 ntBASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cpsf4lE9Q2N0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 224.2 ms