Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC16.24■□□□□ 0.19
Chd2E9PZM4 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 AC153929.1-201ENSMUST00000219009 303 ntBASIC16.24■□□□□ 0.19
Chd2E9PZM4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.24■□□□□ 0.19
Chd2E9PZM4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.23■□□□□ 0.19
Chd2E9PZM4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Snord23-201ENSMUST00000116828 109 ntBASIC16.23■□□□□ 0.19
Chd2E9PZM4 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Gm8384-201ENSMUST00000190905 704 ntBASIC16.23■□□□□ 0.19
Chd2E9PZM4 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Id2-203ENSMUST00000222667 958 ntBASIC16.23■□□□□ 0.19
Chd2E9PZM4 AC105408.1-201ENSMUST00000227771 802 ntBASIC16.23■□□□□ 0.19
Chd2E9PZM4 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Gm9791-201ENSMUST00000060997 447 ntBASIC16.23■□□□□ 0.19
Chd2E9PZM4 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Chd2E9PZM4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm24279-201ENSMUST00000104236 131 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm24078-201ENSMUST00000158184 103 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm17796-201ENSMUST00000189015 1213 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm37284-201ENSMUST00000193607 539 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm7904-201ENSMUST00000217049 465 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm43167-201ENSMUST00000202001 1606 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm15329-201ENSMUST00000121408 155 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Gm8255-201ENSMUST00000218693 305 ntBASIC16.22■□□□□ 0.19
Chd2E9PZM4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd2E9PZM4 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd2E9PZM4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd2E9PZM4 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms