Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav18A0A075B656 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gm24830-201ENSMUST00000102024 166 ntBASIC9.95□□□□□ -0.82
Trav18A0A075B656 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gm25261-201ENSMUST00000157416 134 ntBASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gm8602-201ENSMUST00000184045 607 ntBASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gm26232-201ENSMUST00000083360 166 ntBASIC9.95□□□□□ -0.82
Trav18A0A075B656 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.95□□□□□ -0.82
Trav18A0A075B656 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.95□□□□□ -0.82
Trav18A0A075B656 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.95□□□□□ -0.82
Trav18A0A075B656 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav18A0A075B656 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.94□□□□□ -0.82
Trav18A0A075B656 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.94□□□□□ -0.82
Trav18A0A075B656 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav18A0A075B656 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms