Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcb1Q9Z0H3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Gm11509-201ENSMUST00000117358 325 ntBASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcb1Q9Z0H3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Gm13045-201ENSMUST00000119019 712 ntBASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Gm43947-201ENSMUST00000203019 959 ntBASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Gm10288-201ENSMUST00000084614 537 ntBASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcb1Q9Z0H3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcb1Q9Z0H3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms