Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm42599-201ENSMUST00000201308 469 ntBASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.91□□□□□ -0.5
Atp6ap1Q9R1Q9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm27320-201ENSMUST00000184892 109 ntBASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm43438-201ENSMUST00000198133 379 ntBASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Gm19994-201ENSMUST00000217086 586 ntBASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atp6ap1Q9R1Q9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Atp6ap1Q9R1Q9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.9□□□□□ -0.51
Atp6ap1Q9R1Q9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Atp6ap1Q9R1Q9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Gm12015-201ENSMUST00000117065 843 ntBASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Gm9230-201ENSMUST00000188228 532 ntBASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atp6ap1Q9R1Q9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms