Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clcf1Q9QZM3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm28882-201ENSMUST00000185504 314 ntBASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clcf1Q9QZM3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Clcf1Q9QZM3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms