Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm16071-201ENSMUST00000119589 793 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm23153-201ENSMUST00000175323 313 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm10731-201ENSMUST00000181171 448 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm4034-201ENSMUST00000187674 480 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm29499-201ENSMUST00000189151 486 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm17826-201ENSMUST00000189720 798 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm28329-201ENSMUST00000191208 689 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm29171-201ENSMUST00000191397 486 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm11451-201ENSMUST00000118946 630 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm12899-201ENSMUST00000120565 551 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm28324-201ENSMUST00000187913 264 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm9645-201ENSMUST00000197131 792 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm6867-201ENSMUST00000219165 425 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Nip7Q9CXK8 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.08■□□□□ 0.01
Nip7Q9CXK8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nip7Q9CXK8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nip7Q9CXK8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nip7Q9CXK8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nip7Q9CXK8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.08■□□□□ 0.01
Nip7Q9CXK8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nip7Q9CXK8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nip7Q9CXK8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nip7Q9CXK8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nip7Q9CXK8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nip7Q9CXK8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nip7Q9CXK8 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nip7Q9CXK8 Gm1848-201ENSMUST00000120711 789 ntBASIC15.08■□□□□ 0
Nip7Q9CXK8 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nip7Q9CXK8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.08■□□□□ 0
Nip7Q9CXK8 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.08■□□□□ 0
Nip7Q9CXK8 Gm25072-201ENSMUST00000175233 235 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms