Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gm24231-201ENSMUST00000104315 133 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gm9645-201ENSMUST00000197131 792 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx6-1Q99MA9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.46□□□□□ -0.58
Nkx6-1Q99MA9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Gm11663-201ENSMUST00000117888 290 ntBASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Gm44329-201ENSMUST00000197469 112 ntBASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx6-1Q99MA9 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms