Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm10434-201ENSMUST00000101158 471 ntBASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm24830-201ENSMUST00000102024 166 ntBASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm6023-201ENSMUST00000118217 606 ntBASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Gm26232-201ENSMUST00000083360 166 ntBASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cstf3Q99LI7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cstf3Q99LI7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Cstf3Q99LI7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cstf3Q99LI7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cstf3Q99LI7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cstf3Q99LI7 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.77□□□□□ -0.52
Cstf3Q99LI7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Cstf3Q99LI7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Cstf3Q99LI7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cstf3Q99LI7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm11425-201ENSMUST00000119608 498 ntBASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm13316-201ENSMUST00000140537 691 ntBASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm13570-201ENSMUST00000140763 309 ntBASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.77□□□□□ -0.53
Cstf3Q99LI7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm9396-201ENSMUST00000076703 567 ntBASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.77□□□□□ -0.53
Cstf3Q99LI7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Gm24934-201ENSMUST00000103764 111 ntBASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Mir1982-201ENSMUST00000157368 74 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms