Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col20a1Q923P0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Col20a1Q923P0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Gm15004-201ENSMUST00000119192 630 ntBASIC14.34□□□□□ -0.11
Col20a1Q923P0 Gm8199-201ENSMUST00000121323 823 ntBASIC14.34□□□□□ -0.11
Col20a1Q923P0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Mir3547-201ENSMUST00000175461 88 ntBASIC14.34□□□□□ -0.11
Col20a1Q923P0 Gm27530-201ENSMUST00000184096 98 ntBASIC14.34□□□□□ -0.11
Col20a1Q923P0 Gm28686-201ENSMUST00000187404 609 ntBASIC14.34□□□□□ -0.11
Col20a1Q923P0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.34□□□□□ -0.11
Col20a1Q923P0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.34□□□□□ -0.11
Col20a1Q923P0 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.34□□□□□ -0.11
Col20a1Q923P0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.34□□□□□ -0.11
Col20a1Q923P0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col20a1Q923P0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col20a1Q923P0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col20a1Q923P0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col20a1Q923P0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Col20a1Q923P0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col20a1Q923P0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.33□□□□□ -0.11
Col20a1Q923P0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col20a1Q923P0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col20a1Q923P0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Gm11663-201ENSMUST00000117888 290 ntBASIC14.33□□□□□ -0.12
Col20a1Q923P0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Gm22334-201ENSMUST00000158070 133 ntBASIC14.33□□□□□ -0.12
Col20a1Q923P0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Gm17931-201ENSMUST00000208132 634 ntBASIC14.33□□□□□ -0.12
Col20a1Q923P0 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.33□□□□□ -0.12
Col20a1Q923P0 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col20a1Q923P0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Col20a1Q923P0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.32□□□□□ -0.12
Col20a1Q923P0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Gm15432-201ENSMUST00000121106 195 ntBASIC14.32□□□□□ -0.12
Col20a1Q923P0 Gm12176-201ENSMUST00000121420 875 ntBASIC14.32□□□□□ -0.12
Col20a1Q923P0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col20a1Q923P0 Mir1943-201ENSMUST00000158276 73 ntBASIC14.32□□□□□ -0.12
Col20a1Q923P0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms