Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm29076-201ENSMUST00000187689 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm28302-201ENSMUST00000187931 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm28646-201ENSMUST00000188220 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm28205-201ENSMUST00000189177 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm29032-201ENSMUST00000189797 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm28695-201ENSMUST00000190300 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm37448-201ENSMUST00000192795 697 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm45598-202ENSMUST00000210719 986 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm10752-201ENSMUST00000218348 729 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.09□□□□□ -0.15
Smc1bQ920F6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc1bQ920F6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smc1bQ920F6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.08□□□□□ -0.15
Smc1bQ920F6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smc1bQ920F6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Smc1bQ920F6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smc1bQ920F6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smc1bQ920F6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smc1bQ920F6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smc1bQ920F6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.08□□□□□ -0.16
Smc1bQ920F6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Gm11450-201ENSMUST00000121144 333 ntBASIC14.08□□□□□ -0.16
Smc1bQ920F6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.08□□□□□ -0.16
Smc1bQ920F6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.08□□□□□ -0.16
Smc1bQ920F6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.08□□□□□ -0.16
Smc1bQ920F6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc1bQ920F6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Gm13045-201ENSMUST00000119019 712 ntBASIC14.07□□□□□ -0.16
Smc1bQ920F6 Gm24845-201ENSMUST00000158034 109 ntBASIC14.07□□□□□ -0.16
Smc1bQ920F6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Gm19353-201ENSMUST00000184561 445 ntBASIC14.07□□□□□ -0.16
Smc1bQ920F6 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Gm7600-201ENSMUST00000209657 785 ntBASIC14.07□□□□□ -0.16
Smc1bQ920F6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.07□□□□□ -0.16
Smc1bQ920F6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smc1bQ920F6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms