Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm6082-201ENSMUST00000215204 454 ntBASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdha3Q91Y16 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdha3Q91Y16 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms