Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb5Q91XZ5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Gm13263-201ENSMUST00000121271 838 ntBASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.31□□□□□ -0.12
Pcdhb5Q91XZ5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Gm11956-201ENSMUST00000119525 512 ntBASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Gm15595-201ENSMUST00000120840 961 ntBASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Gm17831-201ENSMUST00000205579 900 ntBASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb5Q91XZ5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb5Q91XZ5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb5Q91XZ5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb5Q91XZ5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb5Q91XZ5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb5Q91XZ5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb5Q91XZ5 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms