Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm12036-201ENSMUST00000120008 530 ntBASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm11424-201ENSMUST00000121929 829 ntBASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.68□□□□□ -0.54
Lsm1Q8VC85 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Gm23912-201ENSMUST00000104687 87 ntBASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.67□□□□□ -0.54
Lsm1Q8VC85 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.67□□□□□ -0.54
Lsm1Q8VC85 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm1Q8VC85 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lsm1Q8VC85 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm1Q8VC85 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm1Q8VC85 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm1Q8VC85 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms