Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm44421-201ENSMUST00000205064 1221 ntBASIC17.11■□□□□ 0.33
Cd109Q8R422 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC17.11■□□□□ 0.33
Cd109Q8R422 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd109Q8R422 AC115122.1-201ENSMUST00000224850 1040 ntBASIC17.11■□□□□ 0.33
Cd109Q8R422 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd109Q8R422 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cd109Q8R422 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Cd109Q8R422 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cd109Q8R422 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC17.1■□□□□ 0.33
Cd109Q8R422 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd109Q8R422 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Cd109Q8R422 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Gm1848-201ENSMUST00000120711 789 ntBASIC17.1■□□□□ 0.33
Cd109Q8R422 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC17.1■□□□□ 0.33
Cd109Q8R422 Gm9358-201ENSMUST00000183067 927 ntBASIC17.1■□□□□ 0.33
Cd109Q8R422 Gm9136-201ENSMUST00000193368 454 ntBASIC17.1■□□□□ 0.33
Cd109Q8R422 Ighv1-60-201ENSMUST00000195816 405 ntBASIC17.1■□□□□ 0.33
Cd109Q8R422 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cd109Q8R422 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC17.1■□□□□ 0.33
Cd109Q8R422 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cd109Q8R422 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd109Q8R422 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cd109Q8R422 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Kcnk16-202ENSMUST00000225596 2127 ntBASIC17.09■□□□□ 0.33
Cd109Q8R422 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cd109Q8R422 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cd109Q8R422 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cd109Q8R422 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cd109Q8R422 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Gm42657-201ENSMUST00000201746 211 ntBASIC17.09■□□□□ 0.33
Cd109Q8R422 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 AC165260.2-203ENSMUST00000224237 336 ntBASIC17.09■□□□□ 0.33
Cd109Q8R422 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cd109Q8R422 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cd109Q8R422 Rnf17-202ENSMUST00000223627 2077 ntBASIC17.09■□□□□ 0.33
Cd109Q8R422 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd109Q8R422 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd109Q8R422 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.08■□□□□ 0.33
Cd109Q8R422 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cd109Q8R422 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cd109Q8R422 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd109Q8R422 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd109Q8R422 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cd109Q8R422 Gm12795-201ENSMUST00000117594 539 ntBASIC17.08■□□□□ 0.32
Cd109Q8R422 Gm7150-201ENSMUST00000122032 981 ntBASIC17.08■□□□□ 0.32
Cd109Q8R422 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cd109Q8R422 Gm8492-201ENSMUST00000182375 987 ntBASIC17.08■□□□□ 0.32
Cd109Q8R422 Mir6998-201ENSMUST00000183343 64 ntBASIC17.08■□□□□ 0.32
Cd109Q8R422 Gm6108-201ENSMUST00000208365 367 ntBASIC17.08■□□□□ 0.32
Cd109Q8R422 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC17.08■□□□□ 0.32
Cd109Q8R422 AC122350.1-201ENSMUST00000228135 533 ntBASIC17.08■□□□□ 0.32
Cd109Q8R422 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Gm18983-201ENSMUST00000222884 2729 ntBASIC17.08■□□□□ 0.32
Cd109Q8R422 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cd109Q8R422 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Cd109Q8R422 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC17.08■□□□□ 0.32
Cd109Q8R422 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cd109Q8R422 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cd109Q8R422 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cd109Q8R422 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd109Q8R422 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Gm13384-201ENSMUST00000117166 1344 ntBASIC17.07■□□□□ 0.32
Cd109Q8R422 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cd109Q8R422 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd109Q8R422 Gm12036-201ENSMUST00000120008 530 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms