Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Gm15004-201ENSMUST00000119192 630 ntBASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Gm8815-201ENSMUST00000173809 620 ntBASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Gm9463-201ENSMUST00000206707 601 ntBASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Gm11956-201ENSMUST00000119525 512 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Gm15566-201ENSMUST00000121130 590 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Gm7666-201ENSMUST00000146631 819 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Gm19287-201ENSMUST00000203190 358 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp7Q8R1T1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Gm9540-201ENSMUST00000188230 478 ntBASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Chmp7Q8R1T1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp7Q8R1T1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp7Q8R1T1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp7Q8R1T1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Chmp7Q8R1T1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp7Q8R1T1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp7Q8R1T1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp7Q8R1T1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Chmp7Q8R1T1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Chmp7Q8R1T1 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chmp7Q8R1T1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms