Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AC079178.1-201ENST00000420915 656 ntBASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AC244157.2-201ENST00000616239 1006 ntBASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AC091951.1-201ENST00000512854 2465 ntBASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.64■□□□□ 0.41
NEDD1Q8NHV4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 AC092384.3-202ENST00000564646 2873 ntBASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 ACE3P-201ENST00000423435 1973 ntBASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 HIST2H2BB-201ENST00000449108 381 ntBASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 AC003102.2-201ENST00000589195 1469 ntBASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEDD1Q8NHV4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 AC009093.2-202ENST00000620513 2079 ntBASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 AC007969.1-201ENST00000433675 447 ntBASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 HSPB1P2-201ENST00000448722 546 ntBASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 MIR4683-201ENST00000579659 81 ntBASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 MIR4525-201ENST00000580000 75 ntBASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 AC005695.3-201ENST00000614522 232 ntBASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 AL096828.3-201ENST00000615354 462 ntBASIC17.62■□□□□ 0.41
NEDD1Q8NHV4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms