Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Rprl1-202ENSMUST00000198476 238 ntBASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Gm18711-201ENSMUST00000199341 750 ntBASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a1Q8K4Z5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Gm44651-201ENSMUST00000207343 372 ntBASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a1Q8K4Z5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm13665-201ENSMUST00000120830 528 ntBASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm25700-201ENSMUST00000177693 110 ntBASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm27390-201ENSMUST00000184516 176 ntBASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm32999-201ENSMUST00000192693 562 ntBASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm45598-202ENSMUST00000210719 986 ntBASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm9257-201ENSMUST00000221254 232 ntBASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms