Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm24398-201ENSMUST00000157870 109 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm24844-201ENSMUST00000158679 127 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm8531-201ENSMUST00000188319 893 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm37458-201ENSMUST00000194055 410 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm44506-201ENSMUST00000206278 965 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm2553-201ENSMUST00000215986 605 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.73□□□□□ -0.21
Syne4Q8CII8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.72□□□□□ -0.21
Syne4Q8CII8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.72□□□□□ -0.21
Syne4Q8CII8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm11801-201ENSMUST00000117807 746 ntBASIC13.72□□□□□ -0.21
Syne4Q8CII8 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm43852-201ENSMUST00000202098 917 ntBASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm44158-201ENSMUST00000203881 505 ntBASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm44882-201ENSMUST00000205702 802 ntBASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.72□□□□□ -0.21
Syne4Q8CII8 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.72□□□□□ -0.21
Syne4Q8CII8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Syne4Q8CII8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.71□□□□□ -0.21
Syne4Q8CII8 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.71□□□□□ -0.21
Syne4Q8CII8 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.71□□□□□ -0.21
Syne4Q8CII8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne4Q8CII8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Syne4Q8CII8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syne4Q8CII8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syne4Q8CII8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syne4Q8CII8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Syne4Q8CII8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syne4Q8CII8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms