Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gm15610-201ENSMUST00000120584 195 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gm14441-201ENSMUST00000121960 540 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gm14665-201ENSMUST00000122294 557 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gm4310-201ENSMUST00000177847 889 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gm9211-201ENSMUST00000182882 975 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gm8956-201ENSMUST00000203939 825 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gm45770-201ENSMUST00000212105 616 ntBASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa4Q8CA71 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Gm12208-201ENSMUST00000122004 163 ntBASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Gm8343-201ENSMUST00000182705 994 ntBASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Gm5369-201ENSMUST00000217499 588 ntBASIC14.05□□□□□ -0.16
Shisa4Q8CA71 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Gm5705-201ENSMUST00000066241 711 ntBASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa4Q8CA71 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Gm23596-201ENSMUST00000104304 132 ntBASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Gm13611-201ENSMUST00000118269 318 ntBASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Gm3332-201ENSMUST00000189337 928 ntBASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa4Q8CA71 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.04□□□□□ -0.16
Shisa4Q8CA71 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms