Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.81□□□□□ -0.36
Uba3Q8C878 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.81□□□□□ -0.36
Uba3Q8C878 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Uba3Q8C878 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Uba3Q8C878 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Uba3Q8C878 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Mir877-201ENSMUST00000104738 85 ntBASIC12.8□□□□□ -0.36
Uba3Q8C878 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.8□□□□□ -0.36
Uba3Q8C878 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.8□□□□□ -0.36
Uba3Q8C878 Gm18711-201ENSMUST00000199341 750 ntBASIC12.8□□□□□ -0.36
Uba3Q8C878 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Gm45598-202ENSMUST00000210719 986 ntBASIC12.8□□□□□ -0.36
Uba3Q8C878 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Uba3Q8C878 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.8□□□□□ -0.36
Uba3Q8C878 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Uba3Q8C878 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.79□□□□□ -0.36
Uba3Q8C878 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.79□□□□□ -0.36
Uba3Q8C878 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.79□□□□□ -0.36
Uba3Q8C878 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.79□□□□□ -0.36
Uba3Q8C878 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.79□□□□□ -0.36
Uba3Q8C878 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.79□□□□□ -0.36
Uba3Q8C878 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.79□□□□□ -0.36
Uba3Q8C878 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Uba3Q8C878 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Gm27390-201ENSMUST00000184516 176 ntBASIC12.79□□□□□ -0.36
Uba3Q8C878 Gm32999-201ENSMUST00000192693 562 ntBASIC12.79□□□□□ -0.36
Uba3Q8C878 Gm4857-201ENSMUST00000192718 785 ntBASIC12.79□□□□□ -0.36
Uba3Q8C878 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.79□□□□□ -0.36
Uba3Q8C878 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.79□□□□□ -0.36
Uba3Q8C878 Gm44262-201ENSMUST00000204969 372 ntBASIC12.79□□□□□ -0.36
Uba3Q8C878 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Uba3Q8C878 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Uba3Q8C878 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.79□□□□□ -0.36
Uba3Q8C878 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Uba3Q8C878 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Uba3Q8C878 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Uba3Q8C878 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.78□□□□□ -0.36
Uba3Q8C878 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms