Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tsen54Q8C2A2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tsen54Q8C2A2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Gm5687-201ENSMUST00000118252 640 ntBASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Gm13612-201ENSMUST00000119276 390 ntBASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Gm5035-201ENSMUST00000215581 927 ntBASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Gm5186-201ENSMUST00000218781 920 ntBASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tsen54Q8C2A2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.19□□□□□ -0.78
Tsen54Q8C2A2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms